Protein ZmOrphan96
ZmOrphan96 is a protein in the Orphans family.
Information
Orphans Name: ZmOrphan96
Species: Maize
Orphans Family: Orphans
Gene Name(Synonym):
Uniprot ID: A0A1D6PDQ1
Subgenome: 1

Protein ZmOrphan96

ZmOrphan96 is a protein in the Orphans family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF00917
Zm00001eb030930_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d030958DAPseq no logo sequence fimo position
Zm00001d030958DAPseq no logo sequence fimo position
Zm00001d030958ChIPseq no logo sequence fimo position
Zm00001d030958PChIPseq no logo sequence fimo position

Interactions where ZmOrphan96 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmOrphan96 is the target  
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There are 62 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb030930_T001 from maize genome v5

Amino Acid Sequence
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MAGALAEDNAGDGRSSSTEEMSSDDQIHSENPLSEWRSSQQVENRVPPTLRIYLGNDDDDDFSYGPRPSELYGKFTWRID
YFSQINRSELRSTSFDVGAYKWYILIYPRGCGVCDHLSLFLCADHNKLLPGWSHFAQFTIALINKDPKKSKYSDTLHRFW
KKEHDWGWKKFMELSELHDGFIVQDALTIKAQVQVIREKIDRPFRCLDGQYRRELIRVYLSTVEQIYRRFIDEKRRMFSR
LIEDKLGWSSFSGFWLAMDPSVRRHMTREKTETILKVVVKQFFIEKEVTSTLVFDSLYSGLKALEYQSNNKKGIPKITEA
DARSTPMVLIDQDMFVLADDALLLFERAALDTQSHQPLPKKDDKGSPNRTKDDTSSDEFDKDSIERDDRWLEELGCKTLE
LFAVTHIFSRAEAAYQEAMALQLQEELIREEASERAGTELKPKRRAADKKRRGKNM

MAGALAEDNAGDGRSSSTEEMSSDDQIHSENPLSEWRSSQQVENRVPPTLRIYLGNDDDDDFSYGPRPSELYGKFTWRID
YFSQINRSELRSTSFDVGAYKWYILIYPRGCGVCDHLSLFLCADHNKLLPGWSHFAQFTIALINKDPKKSKYSDTLHRFW
KKEHDWGWKKFMELSELHDGFIVQDALTIKAQVQVIREKIDRPFRCLDGQYRRELIRVYLSTVEQIYRRFIDEKRRMFSR
LIEDKLGWSSFSGFWLAMDPSVRRHMTREKTETILKVVVKQFFIEKEVTSTLVFDSLYSGLKALEYQSNNKKGIPKITEA
DARSTPMVLIDQDMFVLADDALLLFERAALDTQSHQPLPKKDDKGSPNRTKDDTSSDEFDKDSIERDDRWLEELGCKTLE
LFAVTHIFSRAEAAYQEAMALQLQEELIREEASERAGTELKPKRRAADKKRRGKNM

MAGALAEDNAGDGRSSSTEEMSSDDQIHSENPLSEWRSSQQVENRVPPTLRIYLGNDDDDDFSYGPRPSELYGKFTWRID
YFSQINRSELRSTSFDVGAYKWYILIYPRGCGVCDHLSLFLCADHNKLLPGWSHFAQFTIALINKDPKKSKYSDTLHRFW
KKEHDWGWKKFMELSELHDGFIVQDALTIKAQVQVIREKIDRPFRCLDGQYRRELIRVYLSTVEQIYRRFIDEKRRMFSR
LIEDKLGWSSFSGFWLAMDPSVRRHMTREKTETILKVVVKQFFIEKEVTSTLVFDSLYSGLKALEYQSNNKKGIPKITEA
DARSTPMVLIDQDMFVLADDALLLFERAALDTQSHQPLPKKDDKGSPNRTKDDTSSDEFDKDSIERDDRWLEELGCKTLE
LFAVTHIFSRAEAAYQEAMALQLQEELIREEASERAGTELKPKRRAADKKRRGKNM

MAGALAEDNAGDGRSSSTEEMSSDDQIHSENPLSEWRSSQQVENRVPPTLRIYLGNDDDDDFSYGPRPSELYGKFTWRID
YFSQINRSELRSTSFDVGAYKWYILIYPRGCGVCDHLSLFLCADHNKLLPGWSHFAQFTIALINKDPKKSKYSDTLHRFW
KKEHDWGWKKFMELSELHDGFIVQDALTIKAQVQVIREKIDRPFRCLDGQYRRELIRVYLSTVEQIYRRFIDEKRRMFSR
LIEDKLGWSSFSGFWLAMDPSVRRHMTREKTETILKVVVKQFFIEKEVTSTLVFDSLYSGLKALEYQSNNKKGIPKITEA
DARSTPMVLIDQDMFVLADDALLLFERAALDTQSHQPLPKKDDKGSPNRTKDDTSSDEFDKDSIERDDRWLEELGCKTLE
LFAVTHIFSRAEAAYQEAMALQLQEELIREEASERAGTELKPKRRAADKKRRGKNM

MAGALAEDNAGDGRSSSTEEMSSDDQIHSENPLSEWRSSQQVENRVPPTLRIYLGNDDDDDFSYGPRPSELYGKFTWRID
YFSQINRSELRSTSFDVGAYKWYILIYPRGCGVCDHLSLFLCADHNKLLPGWSHFAQFTIALINKDPKKSKYSDTLHRFW
KKEHDWGWKKFMELSELHDGFIVQDALTIKAQVQVIREKIDRPFRCLDGQYRRELIRVYLSTVEQIYRRFIDEKRRMFSR
LIEDKLGWSSFSGFWLAMDPSVRRHMTREKTETILKVVVKQFFIEKEVTSTLVFDSLYSGLKALEYQSNNKKGIPKITEA
DARSTPMVLIDQDMFVLADDALLLFERAALDTQSHQPLPKKDDKGSPNRTKDDTSSDEFDKDSIERDDRWLEELGCKTLE
LFAVTHIFSRAEAAYQEAMALQLQEELIREEASERAGTELKPKRRAADKKRRGKNM

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00917
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Nucleotide Sequence
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GACGAGGTAGGCTTTTAGGCGGCTA...

GRMZM2G039094_T01 from maize genome v3


Related TFome: pUT4801

Amino Acid Sequence
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MAGALAEDNAGDGRSSSTEEMSSDDQIHSENPLSEWRSSQQVENRVPPTLRIYLGNDDDDDFSYGPRPSELYGKFTWRID
YFSQINRSELRSTSFDVGAYKWYILIYPRGCGVCDHLSLFLCADHNKLLPGWSHFAQFTIALINKDPKKSKYSDTLHRFW
KKEHDWGWKKFMELSELHDGFIVQDALTIKAQVQVIREKIDRPFRCLDGQYRRELIRVYLSTVEQIYRRFIDEKRRMFSR
LIEDKLGWSSFSGFWLAMDPSVRRHMTREKTETILKVVVKQFFIEKEVTSTLVFDSLYSGLKALEYQSNNKKGIPKITEA
DARSTPMVLIDQDMFVLADDALLLFERAALDTQSHQPLPKKDDKGSPNRTKDDTSSDEFDKDSIERDDRWLEELGCKTLE
LFAVTHIFSRAEAAYQEAMALQLQEELIREEASERAGTELKPKRRAADKKRRGKNM

Nucleotide Sequence
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GACGAGGTAGGCTTTTAGGCGGCTA...

Zm00001d030958_T001 from maize genome v4

Amino Acid Sequence
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MAGALAEDNAGDGRSSSTEEMSSDDQIHSENPLSEWRSSQQVENRVPPTLRIYLGNDDDDDFSYGPRPSELYGKFTWRID
YFSQINRSELRSTSFDVGAYKWYILIYPRGCGVCDHLSLFLCADHNKLLPGWSHFAQFTIALINKDPKKSKYSDTLHRFW
KKEHDWGWKKFMELSELHDGFIVQDALTIKAQVQVIREKIDRPFRCLDGQYRRELIRVYLSTVEQIYRRFIDEKRRMFSR
LIEDKLGWSSFSGFWLAMDPSVRRHMTREKTETILKVVVKQFFIEKEVTSTLVFDSLYSGLKALEYQSNNKKGIPKITEA
DARSTPMVLIDQDMFVLADDALLLFERAALDTQSHQPLPKKDDKGSPNRTKDDTSSDEFDKDSIERDDRWLEELGCKTLE
LFAVTHIFSRAEAAYQEAMALQLQEELIREEASERAGTELKPKRRAADKKRRGKNM

Nucleotide Sequence
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GACGAGGTAGGCTTTTAGGCGGCTA...

Zm00001d030958_T002 from maize genome v4

Amino Acid Sequence
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MAGALAEDNAGDGRSSSTEEMSSDDQIHSENPLSEWRSSQQVENRVPPTLRIYLGNDDDDDFSYGPRPSELYGKFTWRID
YFSQINRSELRSTSFDVGAYKWYILIYPRGCGVCDHLSLFLCADHNKLLPGWSHFAQFTIALINKDPKKSKYSDTLHRFW
KKEHDWGWKKFMELSELHDGFIVQDALTIKAQVQVIREKIDRPFRCLDGQYRRELIRVYLSTVEQIYRRFIDEKRRMFSR
LIEDKLGWSSFSGFWLAMDPSVRRHMTREKTETILKVVVKQFFIEKEVTSTLVFDSLYSGLKALEYQSNNKKGIPKITEA
DARSTPMVLIDQDMFVLADDALLLFERAALDTQSHQPLPKKDDKGSPNRTKDDTSSDEFDKDSIERDDRWLEELGCKTLE
LFAVTHIFSRAEAAYQEAMALQLQEELIREEASERAGTELKPKRRAADKKRRGKNM

Nucleotide Sequence
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CTCAACTAGACCTCACTCGTACGCC...


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